STRINGSTRING
AEA68926.1 AEA68926.1 AEA68927.1 AEA68927.1 AEA69123.1 AEA69123.1 AEA68928.1 AEA68928.1 AEA69124.1 AEA69124.1 AEA69121.1 AEA69121.1 metN-2 metN-2 AEA68929.1 AEA68929.1 AEA66342.1 AEA66342.1 AEA67624.1 AEA67624.1 AEA66401.1 AEA66401.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA68926.1Puttive ABC transport system, ATP-binding protein. (573 aa)    
Predicted Functional Partners:
AEA68927.1
Putative HlyD family secretion protein.
  
 0.956
AEA69123.1
Peptide-transporting ATPase (alkaline protease secretion protein).
  
  
 
0.904
AEA68928.1
Putative ABC transport system, outer membrane protein.
 
  
 0.865
AEA69124.1
Alkaline protease secretion protein.
  
 0.814
AEA69121.1
Alkaline metalloproteinase.
 
 
 0.702
metN-2
Putative D-methionine ABC transporter, ATP-binding component; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
     
0.658
AEA68929.1
Putative mannuronan C-5-epimerase, multi-domains protein.
 
 
 0.630
AEA66342.1
HylD like membrane fusion protein component of ABC transporter required for LapA secretion.
  
 0.614
AEA67624.1
Putative type I secretion membrane fusion protein, HlyD family.
  
 0.610
AEA66401.1
Putative ABC transporter, ATP-binding component.
 
     
0.600
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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