Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA67376.1 | AEA69009.1 | PSEBR_a1197 | PSEBR_a2712 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylornithine deacetylase. | 0.922 |
AEA67376.1 | AEA70809.1 | PSEBR_a1197 | PSEBR_a4400 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.914 |
AEA67376.1 | AEA70995.1 | PSEBR_a1197 | PSEBR_a4580 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Putative ornithine cyclodeaminase. | 0.809 |
AEA67376.1 | arcA | PSEBR_a1197 | PSEBR_a1198 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginine deiminase. | 0.998 |
AEA67376.1 | argD | PSEBR_a1197 | PSEBR_a4319 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Bifunctional protein: Acetylornithine transaminase; Succinyldiaminopimelate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.784 |
AEA67376.1 | argD-2 | PSEBR_a1197 | PSEBR_a4662 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Acetylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.788 |
AEA67376.1 | argG | PSEBR_a1197 | PSEBR_a4390 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.986 |
AEA69006.1 | AEA69007.1 | PSEBR_a2709 | PSEBR_a2710 | Conserved hypothetical protein. | Putative endoribonuclease. | 0.983 |
AEA69006.1 | AEA69008.1 | PSEBR_a2709 | PSEBR_a2711 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.947 |
AEA69006.1 | AEA69009.1 | PSEBR_a2709 | PSEBR_a2712 | Conserved hypothetical protein. | Acetylornithine deacetylase. | 0.823 |
AEA69007.1 | AEA69006.1 | PSEBR_a2710 | PSEBR_a2709 | Putative endoribonuclease. | Conserved hypothetical protein. | 0.983 |
AEA69007.1 | AEA69008.1 | PSEBR_a2710 | PSEBR_a2711 | Putative endoribonuclease. | Conserved hypothetical protein. | 0.951 |
AEA69007.1 | AEA69009.1 | PSEBR_a2710 | PSEBR_a2712 | Putative endoribonuclease. | Acetylornithine deacetylase. | 0.852 |
AEA69008.1 | AEA69006.1 | PSEBR_a2711 | PSEBR_a2709 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.947 |
AEA69008.1 | AEA69007.1 | PSEBR_a2711 | PSEBR_a2710 | Conserved hypothetical protein. | Putative endoribonuclease. | 0.951 |
AEA69008.1 | AEA69009.1 | PSEBR_a2711 | PSEBR_a2712 | Conserved hypothetical protein. | Acetylornithine deacetylase. | 0.844 |
AEA69009.1 | AEA67376.1 | PSEBR_a2712 | PSEBR_a1197 | Acetylornithine deacetylase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.922 |
AEA69009.1 | AEA69006.1 | PSEBR_a2712 | PSEBR_a2709 | Acetylornithine deacetylase. | Conserved hypothetical protein. | 0.823 |
AEA69009.1 | AEA69007.1 | PSEBR_a2712 | PSEBR_a2710 | Acetylornithine deacetylase. | Putative endoribonuclease. | 0.852 |
AEA69009.1 | AEA69008.1 | PSEBR_a2712 | PSEBR_a2711 | Acetylornithine deacetylase. | Conserved hypothetical protein. | 0.844 |
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