STRINGSTRING
AEA69094.1 AEA69094.1 AEA69091.1 AEA69091.1 AEA69090.1 AEA69090.1 AEA69092.1 AEA69092.1 AEA70890.1 AEA70890.1 AEA67293.1 AEA67293.1 AEA69087.1 AEA69087.1 AEA69420.1 AEA69420.1 AEA69085.1 AEA69085.1 AEA71282.1 AEA71282.1 AEA69093.1 AEA69093.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA69094.1Putative transcriptional regulator, LysR-family. (326 aa)    
Predicted Functional Partners:
AEA69091.1
Conserved hypothetical protein.
 
  
 0.804
AEA69090.1
Conserved hypothetical protein, putative outer membrane protein.
 
  
 0.780
AEA69092.1
Conserved hypothetical protein.
  
    0.759
AEA70890.1
Hypothetical protein.
  
    0.740
AEA67293.1
Putative phage tail collar protein.
  
     0.724
AEA69087.1
Putative transport-related membrane protein ExbB2.
 
  
 0.721
AEA69420.1
Conserved hypothetical protein.
  
     0.719
AEA69085.1
Conserved hypothetical protein.
 
    0.707
AEA71282.1
Hypothetical protein; putative exported prorein.
  
     0.690
AEA69093.1
Putative peptidylprolyl isomerase.
  
    0.681
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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