STRINGSTRING
AEA69162.1 AEA69162.1 AEA69160.1 AEA69160.1 AEA69161.1 AEA69161.1 cpdA cpdA AEA69159.1 AEA69159.1 AEA69163.1 AEA69163.1 AEA70606.1 AEA70606.1 AEA70607.1 AEA70607.1 PSEBR_a25 PSEBR_a25 AEA70608.1 AEA70608.1 AEA70609.1 AEA70609.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA69162.1Putative ABC transporter, periplasmic component. (334 aa)    
Predicted Functional Partners:
AEA69160.1
Putative ABC transporter permease component.
 
    0.948
AEA69161.1
Putative ABC transporter, permease component.
 
     0.948
cpdA
Putative cAMP phosphodiesterase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
     0.917
AEA69159.1
Putative ABC transporter ATP-binding component; Belongs to the ABC transporter superfamily.
 
   
 0.848
AEA69163.1
Putative transcriptional regulator, LacI family.
 
     0.839
AEA70606.1
Conserved hypothetical protein.
 
    0.824
AEA70607.1
Putative ABC transporter, permease component.
 
  
 0.795
PSEBR_a25
Putative ABC transporter, permease component.
 
  
 0.718
AEA70608.1
Putative ABC transporter, permease component.
 
    0.714
AEA70609.1
Putative ABC transporter, ATP-binding component; Belongs to the ABC transporter superfamily.
 
  
 0.557
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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