Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEA67873.1 | AEA67880.1 | PSEBR_a1667 | PSEBR_a1674 | Putative peptide synthase. | Diaminobutyrate--2-oxoglutarate transaminase (diaminobutyrate--2-oxoglutarate aminotransferase); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.831 |
| AEA67873.1 | AEA67881.1 | PSEBR_a1667 | PSEBR_a1675 | Putative peptide synthase. | Conserved hypothetical protein. | 0.964 |
| AEA67873.1 | AEA68671.1 | PSEBR_a1667 | PSEBR_a2391 | Putative peptide synthase. | Putative peptide synthase. | 0.997 |
| AEA67873.1 | AEA68674.1 | PSEBR_a1667 | PSEBR_a2394 | Putative peptide synthase. | Putative peptide synthase. | 0.998 |
| AEA67873.1 | AEA68677.1 | PSEBR_a1667 | PSEBR_a2397 | Putative peptide synthase. | Diaminobutyrate--2-oxoglutarate transaminase (diaminobutyrate--2-oxoglutarate aminotransferase); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.827 |
| AEA67873.1 | AEA69296.1 | PSEBR_a1667 | PSEBR_a2993 | Putative peptide synthase. | Putative Acyl-homoserine lactone acylase pvdQ. | 0.867 |
| AEA67873.1 | AEA70296.1 | PSEBR_a1667 | PSEBR_a3906 | Putative peptide synthase. | L-ornithine 5-monooxygenase. | 0.883 |
| AEA67873.1 | AEA70302.1 | PSEBR_a1667 | PSEBR_a3912 | Putative peptide synthase. | Putative dipeptidase. | 0.516 |
| AEA67873.1 | AEA70304.1 | PSEBR_a1667 | PSEBR_a3914 | Putative peptide synthase. | Conserved hypothetical protein. | 0.593 |
| AEA67873.1 | AEA70305.1 | PSEBR_a1667 | PSEBR_a3915 | Putative peptide synthase. | Pyoverdine biosynthesis protein. | 0.885 |
| AEA67880.1 | AEA67873.1 | PSEBR_a1674 | PSEBR_a1667 | Diaminobutyrate--2-oxoglutarate transaminase (diaminobutyrate--2-oxoglutarate aminotransferase); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Putative peptide synthase. | 0.831 |
| AEA67880.1 | AEA67881.1 | PSEBR_a1674 | PSEBR_a1675 | Diaminobutyrate--2-oxoglutarate transaminase (diaminobutyrate--2-oxoglutarate aminotransferase); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Conserved hypothetical protein. | 0.856 |
| AEA67880.1 | AEA68671.1 | PSEBR_a1674 | PSEBR_a2391 | Diaminobutyrate--2-oxoglutarate transaminase (diaminobutyrate--2-oxoglutarate aminotransferase); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Putative peptide synthase. | 0.746 |
| AEA67880.1 | AEA68674.1 | PSEBR_a1674 | PSEBR_a2394 | Diaminobutyrate--2-oxoglutarate transaminase (diaminobutyrate--2-oxoglutarate aminotransferase); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Putative peptide synthase. | 0.691 |
| AEA67880.1 | AEA68677.1 | PSEBR_a1674 | PSEBR_a2397 | Diaminobutyrate--2-oxoglutarate transaminase (diaminobutyrate--2-oxoglutarate aminotransferase); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Diaminobutyrate--2-oxoglutarate transaminase (diaminobutyrate--2-oxoglutarate aminotransferase); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.902 |
| AEA67880.1 | AEA69296.1 | PSEBR_a1674 | PSEBR_a2993 | Diaminobutyrate--2-oxoglutarate transaminase (diaminobutyrate--2-oxoglutarate aminotransferase); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Putative Acyl-homoserine lactone acylase pvdQ. | 0.706 |
| AEA67880.1 | AEA70296.1 | PSEBR_a1674 | PSEBR_a3906 | Diaminobutyrate--2-oxoglutarate transaminase (diaminobutyrate--2-oxoglutarate aminotransferase); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | L-ornithine 5-monooxygenase. | 0.694 |
| AEA67880.1 | AEA70302.1 | PSEBR_a1674 | PSEBR_a3912 | Diaminobutyrate--2-oxoglutarate transaminase (diaminobutyrate--2-oxoglutarate aminotransferase); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Putative dipeptidase. | 0.594 |
| AEA67880.1 | AEA70304.1 | PSEBR_a1674 | PSEBR_a3914 | Diaminobutyrate--2-oxoglutarate transaminase (diaminobutyrate--2-oxoglutarate aminotransferase); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Conserved hypothetical protein. | 0.608 |
| AEA67880.1 | AEA70305.1 | PSEBR_a1674 | PSEBR_a3915 | Diaminobutyrate--2-oxoglutarate transaminase (diaminobutyrate--2-oxoglutarate aminotransferase); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Pyoverdine biosynthesis protein. | 0.518 |
page 1 of 6