STRINGSTRING
AEA69322.1 AEA69322.1 AEA71204.1 AEA71204.1 AEA66677.1 AEA66677.1 AEA71202.1 AEA71202.1 AEA71203.1 AEA71203.1 AEA67479.1 AEA67479.1 AEA66741.1 AEA66741.1 AEA66339.1 AEA66339.1 AEA71916.1 AEA71916.1 AEA69420.1 AEA69420.1 AEA67501.1 AEA67501.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA69322.1Putative UvrD/REP helicase. (823 aa)    
Predicted Functional Partners:
AEA71204.1
Conserved hypothetical protein.
 
 
 0.827
AEA66677.1
Conserved hypothetical protein.
  
     0.772
AEA71202.1
Conserved hypothetical protein.
  
     0.771
AEA71203.1
Conserved hypothetical protein.
  
     0.768
AEA67479.1
Conserved hypothetical protein.
  
    0.753
AEA66741.1
Conserved hypothetical protein.
  
     0.745
AEA66339.1
Conserved hypothetical protein.
  
     0.740
AEA71916.1
Putative transcriptional regulator, TetR family.
  
    0.739
AEA69420.1
Conserved hypothetical protein.
  
     0.736
AEA67501.1
Putative (R)-3-hydroxydecanoyl-ACP:CoA transacylase.
  
     0.725
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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