STRINGSTRING
AEA69343.1 AEA69343.1 AEA69344.1 AEA69344.1 AEA72118.1 AEA72118.1 AEA69342.1 AEA69342.1 AEA66558.1 AEA66558.1 lysS lysS AEA67432.1 AEA67432.1 AEA69206.1 AEA69206.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA69343.1Conserved hypothetical protein. (231 aa)    
Predicted Functional Partners:
AEA69344.1
Putative Transcription factor, Xre family.
 
    0.825
AEA72118.1
Putative transcriptional regulator.
  
  
 0.792
AEA69342.1
Putative dihydrodipicolinate synthase; Belongs to the DapA family.
       0.693
AEA66558.1
Putative arginine--tRNA ligase (Arginyl-tRNA synthetase), C-term; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.646
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
      0.598
AEA67432.1
Amino acid transporter, LysE family.
  
    0.523
AEA69206.1
Conserved hypothetical protein.
   
    0.406
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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