STRINGSTRING
xylB xylB xylA xylA AEA71573.1 AEA71573.1 AEA69399.1 AEA69399.1 AEA69397.1 AEA69397.1 AEA71765.1 AEA71765.1 AEA69349.1 AEA69349.1 AEA71122.1 AEA71122.1 AEA68888.1 AEA68888.1 AEA69394.1 AEA69394.1 tal tal
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylBXylulokinase (mltY). (513 aa)    
Predicted Functional Partners:
xylA
Xylose isomerase; Belongs to the xylose isomerase family.
 
 
 0.984
AEA71573.1
Putative ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
 
  
 0.943
AEA69399.1
Fructokinase (mltZ).
 
  
 0.843
AEA69397.1
Putative mannitol 2-dehydrogenase (mltD).
 
   
 0.709
AEA71765.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.690
AEA69349.1
Putative Transketolase, C-terminal domain protein.
  
 
 0.675
AEA71122.1
Putative aldolase.
  
  
 0.655
AEA68888.1
Putative Xylose operon regulatory protein.
 
 
 
 0.623
AEA69394.1
Putative ABC transporter, permease component.
 
   
 0.623
tal
Transaldolase (transaldolase B); Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 
 0.617
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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