Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA66427.1 | AEA68671.1 | PSEBR_a292 | PSEBR_a2391 | Putative bifunctional protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase. | Putative peptide synthase. | 0.638 |
AEA66427.1 | AEA68672.1 | PSEBR_a292 | PSEBR_a2392 | Putative bifunctional protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase. | Putative peptide synthase. | 0.631 |
AEA66427.1 | AEA68674.1 | PSEBR_a292 | PSEBR_a2394 | Putative bifunctional protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase. | Putative peptide synthase. | 0.582 |
AEA66427.1 | AEA68731.1 | PSEBR_a292 | PSEBR_a2451 | Putative bifunctional protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase. | Putative polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.425 |
AEA66427.1 | AEA69444.1 | PSEBR_a292 | PSEBR_a3136 | Putative bifunctional protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase. | Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.659 |
AEA66427.1 | AEA70306.1 | PSEBR_a292 | PSEBR_a3916 | Putative bifunctional protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase. | Pyoverdine synthetase. | 0.582 |
AEA66427.1 | AEA70895.1 | PSEBR_a292 | PSEBR_a4483 | Putative bifunctional protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase. | Putative enoyl-CoA hydratase/isomerase. | 0.737 |
AEA68546.1 | AEA68671.1 | PSEBR_a2269 | PSEBR_a2391 | 3-hydroxybutyryl-CoA dehydrogenase. | Putative peptide synthase. | 0.638 |
AEA68546.1 | AEA68672.1 | PSEBR_a2269 | PSEBR_a2392 | 3-hydroxybutyryl-CoA dehydrogenase. | Putative peptide synthase. | 0.631 |
AEA68546.1 | AEA68674.1 | PSEBR_a2269 | PSEBR_a2394 | 3-hydroxybutyryl-CoA dehydrogenase. | Putative peptide synthase. | 0.582 |
AEA68546.1 | AEA68731.1 | PSEBR_a2269 | PSEBR_a2451 | 3-hydroxybutyryl-CoA dehydrogenase. | Putative polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.425 |
AEA68546.1 | AEA69444.1 | PSEBR_a2269 | PSEBR_a3136 | 3-hydroxybutyryl-CoA dehydrogenase. | Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.754 |
AEA68546.1 | AEA70306.1 | PSEBR_a2269 | PSEBR_a3916 | 3-hydroxybutyryl-CoA dehydrogenase. | Pyoverdine synthetase. | 0.582 |
AEA68546.1 | AEA70895.1 | PSEBR_a2269 | PSEBR_a4483 | 3-hydroxybutyryl-CoA dehydrogenase. | Putative enoyl-CoA hydratase/isomerase. | 0.760 |
AEA68671.1 | AEA66427.1 | PSEBR_a2391 | PSEBR_a292 | Putative peptide synthase. | Putative bifunctional protein: 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase. | 0.638 |
AEA68671.1 | AEA68546.1 | PSEBR_a2391 | PSEBR_a2269 | Putative peptide synthase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.638 |
AEA68671.1 | AEA68672.1 | PSEBR_a2391 | PSEBR_a2392 | Putative peptide synthase. | Putative peptide synthase. | 0.999 |
AEA68671.1 | AEA68674.1 | PSEBR_a2391 | PSEBR_a2394 | Putative peptide synthase. | Putative peptide synthase. | 0.999 |
AEA68671.1 | AEA68731.1 | PSEBR_a2391 | PSEBR_a2451 | Putative peptide synthase. | Putative polyketide synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.999 |
AEA68671.1 | AEA69442.1 | PSEBR_a2391 | PSEBR_a3134 | Putative peptide synthase. | Putative AMP-binding enzyme, putative feruloyl-CoA synthase. | 0.891 |
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