STRINGSTRING
AEA69549.1 AEA69549.1 AEA69547.1 AEA69547.1 AEA69548.1 AEA69548.1 AEA69087.1 AEA69087.1 AEA69091.1 AEA69091.1 AEA69088.1 AEA69088.1 AEA69090.1 AEA69090.1 AEA69534.1 AEA69534.1 AEA69086.1 AEA69086.1 AEA69089.1 AEA69089.1 AEA69126.1 AEA69126.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA69549.1Putative TonB-dependent siderophore receptor. (210 aa)    
Predicted Functional Partners:
AEA69547.1
Putative iron siderophore-related protein.
 
  
 0.951
AEA69548.1
Putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.942
AEA69087.1
Putative transport-related membrane protein ExbB2.
 
 
 0.915
AEA69091.1
Conserved hypothetical protein.
 
   
 0.816
AEA69088.1
Putative transport protein ExbD.
 
 
 0.815
AEA69090.1
Conserved hypothetical protein, putative outer membrane protein.
 
   
 0.813
AEA69534.1
Conserved hypothetical protein.
 
   
 0.784
AEA69086.1
Conserved hypothetical protein, putative outer membrane protein.
 
  
 0.780
AEA69089.1
Conserved hypothetical protein.
  
     0.772
AEA69126.1
Putative serine protease.
 
  
 0.744
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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