Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEA66478.1 | AEA66479.1 | PSEBR_a339 | PSEBR_a340 | Putative Fe(2+) trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.830 |
| AEA66478.1 | AEA66480.1 | PSEBR_a339 | PSEBR_a341 | Putative Fe(2+) trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Conserved hypothetical protein; putative AsmA family protein. | 0.809 |
| AEA66478.1 | AEA66481.1 | PSEBR_a339 | PSEBR_a342 | Putative Fe(2+) trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | Conserved hypothetical protein. | 0.542 |
| AEA66479.1 | AEA66478.1 | PSEBR_a340 | PSEBR_a339 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Putative Fe(2+) trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.830 |
| AEA66479.1 | AEA66480.1 | PSEBR_a340 | PSEBR_a341 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Conserved hypothetical protein; putative AsmA family protein. | 0.815 |
| AEA66479.1 | AEA66481.1 | PSEBR_a340 | PSEBR_a342 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Conserved hypothetical protein. | 0.542 |
| AEA66479.1 | AEA68012.1 | PSEBR_a340 | PSEBR_a1798 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Putative exodeoxyribonuclease III. | 0.691 |
| AEA66479.1 | AEA70080.1 | PSEBR_a340 | PSEBR_a3728 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Exodeoxyribonuclease III. | 0.706 |
| AEA66479.1 | AEA72053.1 | PSEBR_a340 | PSEBR_a5526 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Catabolite repression control protein. | 0.696 |
| AEA66479.1 | PSEBR_a2 | PSEBR_a340 | PSEBR_a2 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.626 |
| AEA66479.1 | birA | PSEBR_a340 | PSEBR_a5102 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Putative bifunctional protein (birA): biotin operon repressor; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.612 |
| AEA66479.1 | mutS | PSEBR_a340 | PSEBR_a1098 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | DNA mismatch repair protein, MutS Family domain V; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. | 0.501 |
| AEA66479.1 | sfsA | PSEBR_a340 | PSEBR_a4807 | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | Putative transcription factor, SfsA family; Belongs to the SfsA family. | 0.936 |
| AEA66480.1 | AEA66478.1 | PSEBR_a341 | PSEBR_a339 | Conserved hypothetical protein; putative AsmA family protein. | Putative Fe(2+) trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.809 |
| AEA66480.1 | AEA66479.1 | PSEBR_a341 | PSEBR_a340 | Conserved hypothetical protein; putative AsmA family protein. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.815 |
| AEA66480.1 | AEA66481.1 | PSEBR_a341 | PSEBR_a342 | Conserved hypothetical protein; putative AsmA family protein. | Conserved hypothetical protein. | 0.619 |
| AEA66481.1 | AEA66478.1 | PSEBR_a342 | PSEBR_a339 | Conserved hypothetical protein. | Putative Fe(2+) trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes. | 0.542 |
| AEA66481.1 | AEA66479.1 | PSEBR_a342 | PSEBR_a340 | Conserved hypothetical protein. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.542 |
| AEA66481.1 | AEA66480.1 | PSEBR_a342 | PSEBR_a341 | Conserved hypothetical protein. | Conserved hypothetical protein; putative AsmA family protein. | 0.619 |
| AEA68012.1 | AEA66479.1 | PSEBR_a1798 | PSEBR_a340 | Putative exodeoxyribonuclease III. | A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. | 0.691 |
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