STRINGSTRING
AEA69957.1 AEA69957.1 AEA67636.1 AEA67636.1 AEA71494.1 AEA71494.1 AEA69862.1 AEA69862.1 AEA70501.1 AEA70501.1 AEA70032.1 AEA70032.1 AEA69611.1 AEA69611.1 AEA71689.1 AEA71689.1 AEA69510.1 AEA69510.1 AEA69958.1 AEA69958.1 AEA71691.1 AEA71691.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
AEA69957.1Putative Transcription factor, AraC family. (337 aa)    
Predicted Functional Partners:
AEA67636.1
Putative transcription factor, AraC family.
  
   0.696
AEA71494.1
Putative transcriptional regulator, AraC family.
  
     0.690
AEA69862.1
Putative Transcription factor, AraC family.
  
   0.672
AEA70501.1
Putative response regulator, YesN family.
  
     0.647
AEA70032.1
Putative Transcription factor, AraC family.
  
     0.645
AEA69611.1
Putative Transcription factor, AraC family.
  
   0.637
AEA71689.1
Sarcosine oxidase, gamma subunit.
 
    0.619
AEA69510.1
Putative Transcription factor, AraC family.
  
   0.598
AEA69958.1
4-hydroxyproline epimerase; Belongs to the proline racemase family.
       0.598
AEA71691.1
Sarcosine oxidase, delta subunit.
 
    0.589
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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