STRINGSTRING
PSEBR_a37 PSEBR_a37 znuC znuC PSEBR_a34 PSEBR_a34 AEA70347.1 AEA70347.1 AEA70348.1 AEA70348.1 AEA70346.1 AEA70346.1 fur fur AEA72146.1 AEA72146.1 AEA72145.1 AEA72145.1 AEA71553.1 AEA71553.1 PSEBR_a33 PSEBR_a33
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEBR_a37Zinc ABC transporter, periplasmic component. (312 aa)    
Predicted Functional Partners:
znuC
Zinc ABC transporter, ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
 
 
 0.997
PSEBR_a34
Zinc ABC transporter, permease component.
 
 
 0.994
AEA70347.1
Putative ABC transporter, ATP-binding component.
 
 
 0.975
AEA70348.1
Putative ABC transporter, permease component.
 
 
 0.974
AEA70346.1
Putative ABC transporter, periplasmic component; Belongs to the bacterial solute-binding protein 9 family.
 
  
0.941
fur
Putative transcription factor, Fur family; Belongs to the Fur family.
 
  
 0.854
AEA72146.1
Putative ABC transporter, permease component.
 
  
 0.840
AEA72145.1
Putative ABC trasnporter, ATP-binding component.
 
  
 0.799
AEA71553.1
Putative peptidase.
 
  
 0.735
PSEBR_a33
Putative lipoprotein.
     
 0.571
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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