STRINGSTRING
AEA70062.1 AEA70062.1 AEA70061.1 AEA70061.1 AEA70063.1 AEA70063.1 rbsD rbsD AEA70433.1 AEA70433.1 AEA69663.1 AEA69663.1 AEA68456.1 AEA68456.1 AEA68539.1 AEA68539.1 rbsK rbsK AEA69665.1 AEA69665.1 AEA68502.1 AEA68502.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEA70062.1Ribose ABC transporter, ATP-binding component. (517 aa)    
Predicted Functional Partners:
AEA70061.1
Ribose ABC transporter, permease component; Belongs to the binding-protein-dependent transport system permease family.
 0.995
AEA70063.1
Ribose ABC transporter, periplasmic component.
 
 0.990
rbsD
D-ribose pyranase; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.968
AEA70433.1
L-arabinose ABC transporter, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.911
AEA69663.1
Putative ribose ABC transporter, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.907
AEA68456.1
Conserved hypothetical protein.
  
 0.895
AEA68539.1
Putative transporter, periplasmic protein.
  
 0.891
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.879
AEA69665.1
Putative ribose ABC transporter, periplasmic component.
 
 
 0.875
AEA68502.1
Putative transporter, periplasmic protein.
 
 
 0.874
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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