STRINGSTRING
AEA70088.1 AEA70088.1 AEA70089.1 AEA70089.1 AEA70090.1 AEA70090.1 glcB glcB AEA71097.1 AEA71097.1 AEA68055.1 AEA68055.1 AEA68335.1 AEA68335.1 PSEBR_a32 PSEBR_a32 AEA71311.1 AEA71311.1 AEA71506.1 AEA71506.1 AEA67032.1 AEA67032.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA70088.1Glycolate oxidase, subunit D. (499 aa)    
Predicted Functional Partners:
AEA70089.1
Glycolate oxidase, subunit E.
 
0.998
AEA70090.1
Glycolate oxidase (iron-sulfur), subunit F.
 
 
 0.997
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.930
AEA71097.1
Gluconate 2-dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 
 0.925
AEA68055.1
Putative catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
 0.913
AEA68335.1
Putative catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
 0.913
PSEBR_a32
Catalase HPII; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.913
AEA71311.1
Catalase; Belongs to the catalase family.
   
 0.913
AEA71506.1
Catalase; Belongs to the catalase family.
   
 0.913
AEA67032.1
Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 0.913
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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