STRINGSTRING
AEA70395.1 AEA70395.1 AEA69179.1 AEA69179.1 AEA70501.1 AEA70501.1 AEA68817.1 AEA68817.1 AEA71263.1 AEA71263.1 AEA69282.1 AEA69282.1 AEA69259.1 AEA69259.1 AEA68757.1 AEA68757.1 AEA68971.1 AEA68971.1 AEA68267.1 AEA68267.1 AEA67372.1 AEA67372.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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[Homology]
Score
AEA70395.1Putative Transcription factor, AraC family. (299 aa)    
Predicted Functional Partners:
AEA69179.1
Putative Transcription factor, AraC family.
  
 
 0.754
AEA70501.1
Putative response regulator, YesN family.
  
     0.666
AEA68817.1
Putative Transcription factor, AraC family.
  
     0.631
AEA71263.1
Conserved hypothetical protein.
  
     0.628
AEA69282.1
Putative transcriptional regulator, AraC family.
  
     0.621
AEA69259.1
Putative transcriptional regulator, AraC family.
  
   0.609
AEA68757.1
Putative Transcription factor, AraC family.
  
     0.607
AEA68971.1
Transcriptional regulator, AraC family.
  
     0.581
AEA68267.1
Putative transcription factor, AraC family.
  
     0.574
AEA67372.1
Putative Transcription factor, AraC family.
  
   0.544
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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