Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA67830.1 | AEA70532.1 | PSEBR_a1626 | PSEBR_a4127 | Putative aromatic ring dioxygenase. | Putative pirin-like protein; Belongs to the pirin family. | 0.753 |
AEA70530.1 | AEA70531.1 | PSEBR_a4125 | PSEBR_a4126 | Conserved hypothetical protein. | Putative exported hydrolase. | 0.571 |
AEA70530.1 | AEA70532.1 | PSEBR_a4125 | PSEBR_a4127 | Conserved hypothetical protein. | Putative pirin-like protein; Belongs to the pirin family. | 0.456 |
AEA70531.1 | AEA70530.1 | PSEBR_a4126 | PSEBR_a4125 | Putative exported hydrolase. | Conserved hypothetical protein. | 0.571 |
AEA70531.1 | AEA70532.1 | PSEBR_a4126 | PSEBR_a4127 | Putative exported hydrolase. | Putative pirin-like protein; Belongs to the pirin family. | 0.543 |
AEA70532.1 | AEA67830.1 | PSEBR_a4127 | PSEBR_a1626 | Putative pirin-like protein; Belongs to the pirin family. | Putative aromatic ring dioxygenase. | 0.753 |
AEA70532.1 | AEA70530.1 | PSEBR_a4127 | PSEBR_a4125 | Putative pirin-like protein; Belongs to the pirin family. | Conserved hypothetical protein. | 0.456 |
AEA70532.1 | AEA70531.1 | PSEBR_a4127 | PSEBR_a4126 | Putative pirin-like protein; Belongs to the pirin family. | Putative exported hydrolase. | 0.543 |