Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEA66637.1 | AEA70575.1 | PSEBR_a492 | PSEBR_a4170 | Putative carbamoyltransferase. | Putative major facilitator transporter. | 0.404 |
| AEA68999.1 | AEA70575.1 | PSEBR_a2702 | PSEBR_a4170 | Conserved hypothetical protein. | Putative major facilitator transporter. | 0.449 |
| AEA69760.1 | AEA70575.1 | PSEBR_a3436 | PSEBR_a4170 | Putative phosphatase. | Putative major facilitator transporter. | 0.582 |
| AEA70575.1 | AEA66637.1 | PSEBR_a4170 | PSEBR_a492 | Putative major facilitator transporter. | Putative carbamoyltransferase. | 0.404 |
| AEA70575.1 | AEA68999.1 | PSEBR_a4170 | PSEBR_a2702 | Putative major facilitator transporter. | Conserved hypothetical protein. | 0.449 |
| AEA70575.1 | AEA69760.1 | PSEBR_a4170 | PSEBR_a3436 | Putative major facilitator transporter. | Putative phosphatase. | 0.582 |
| AEA70575.1 | AEA70577.1 | PSEBR_a4170 | PSEBR_a4172 | Putative major facilitator transporter. | Conserved hypothetical protein. | 0.546 |
| AEA70575.1 | AEA70578.1 | PSEBR_a4170 | PSEBR_a4173 | Putative major facilitator transporter. | Conserved hypothetical protein. | 0.437 |
| AEA70575.1 | aroC | PSEBR_a4170 | PSEBR_a4171 | Putative major facilitator transporter. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.735 |
| AEA70575.1 | mtnD | PSEBR_a4170 | PSEBR_c2g87 | Putative major facilitator transporter. | Putative oxidoreductase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. | 0.766 |
| AEA70577.1 | AEA70575.1 | PSEBR_a4172 | PSEBR_a4170 | Conserved hypothetical protein. | Putative major facilitator transporter. | 0.546 |
| AEA70577.1 | AEA70578.1 | PSEBR_a4172 | PSEBR_a4173 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.594 |
| AEA70577.1 | aroC | PSEBR_a4172 | PSEBR_a4171 | Conserved hypothetical protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.579 |
| AEA70577.1 | mtnD | PSEBR_a4172 | PSEBR_c2g87 | Conserved hypothetical protein. | Putative oxidoreductase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. | 0.586 |
| AEA70578.1 | AEA70575.1 | PSEBR_a4173 | PSEBR_a4170 | Conserved hypothetical protein. | Putative major facilitator transporter. | 0.437 |
| AEA70578.1 | AEA70577.1 | PSEBR_a4173 | PSEBR_a4172 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.594 |
| AEA70578.1 | aroC | PSEBR_a4173 | PSEBR_a4171 | Conserved hypothetical protein. | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.471 |
| AEA70578.1 | mtnD | PSEBR_a4173 | PSEBR_c2g87 | Conserved hypothetical protein. | Putative oxidoreductase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway. | 0.410 |
| aroC | AEA70575.1 | PSEBR_a4171 | PSEBR_a4170 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Putative major facilitator transporter. | 0.735 |
| aroC | AEA70577.1 | PSEBR_a4171 | PSEBR_a4172 | Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Conserved hypothetical protein. | 0.579 |
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