STRINGSTRING
AEA70656.1 AEA70656.1 AEA70657.1 AEA70657.1 AEA66686.1 AEA66686.1 AEA68671.1 AEA68671.1 AEA67342.1 AEA67342.1 AEA68674.1 AEA68674.1 AEA70306.1 AEA70306.1 AEA67341.1 AEA67341.1 AEA71553.1 AEA71553.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA70656.1Putative lipoprotein. (178 aa)    
Predicted Functional Partners:
AEA70657.1
Putative lipoprotein.
 
    
0.595
AEA66686.1
N-acetylmuramoyl-L-alanine amidase.
  
  
 0.486
AEA68671.1
Putative peptide synthase.
  
  
 0.468
AEA67342.1
Conserved hypothetical protein; putative OmpA/MotB, putative OmpA family protein.
 
 
 0.451
AEA68674.1
Putative peptide synthase.
  
  
 0.420
AEA70306.1
Pyoverdine synthetase.
  
  
 0.420
AEA67341.1
Conserved hypothetical protein; putative outer membrane protein.
 
 
 0.412
AEA71553.1
Putative peptidase.
  
  
 0.403
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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