Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEA67660.1 | AEA67664.1 | PSEBR_a1465 | PSEBR_a1469 | Flagellar hook-associated protein. | Putative flagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.933 |
| AEA67660.1 | AEA67666.1 | PSEBR_a1465 | PSEBR_a1471 | Flagellar hook-associated protein. | Putative flagellar hook associated protein (FliD); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.983 |
| AEA67660.1 | AEA67667.1 | PSEBR_a1465 | PSEBR_a1472 | Flagellar hook-associated protein. | Flagellar protein. | 0.994 |
| AEA67660.1 | AEA68701.1 | PSEBR_a1465 | PSEBR_a2422 | Flagellar hook-associated protein. | Putative flagellar hook capping protein. | 0.933 |
| AEA67660.1 | csrA | PSEBR_a1465 | PSEBR_a1523 | Flagellar hook-associated protein. | Regulator of secondary metabolites; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | 0.498 |
| AEA67660.1 | csrA-2 | PSEBR_a1465 | PSEBR_a3716 | Flagellar hook-associated protein. | Regulator of secondary metabolites; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | 0.497 |
| AEA67660.1 | csrA-3 | PSEBR_a1465 | PSEBR_a4308 | Flagellar hook-associated protein. | Regulator of secondary metabolites; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | 0.483 |
| AEA67664.1 | AEA67660.1 | PSEBR_a1469 | PSEBR_a1465 | Putative flagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar hook-associated protein. | 0.933 |
| AEA67664.1 | AEA67666.1 | PSEBR_a1469 | PSEBR_a1471 | Putative flagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Putative flagellar hook associated protein (FliD); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.987 |
| AEA67664.1 | AEA67667.1 | PSEBR_a1469 | PSEBR_a1472 | Putative flagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Flagellar protein. | 0.994 |
| AEA67664.1 | AEA68701.1 | PSEBR_a1469 | PSEBR_a2422 | Putative flagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Putative flagellar hook capping protein. | 0.902 |
| AEA67664.1 | csrA | PSEBR_a1469 | PSEBR_a1523 | Putative flagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Regulator of secondary metabolites; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | 0.657 |
| AEA67664.1 | csrA-2 | PSEBR_a1469 | PSEBR_a3716 | Putative flagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Regulator of secondary metabolites; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | 0.644 |
| AEA67664.1 | csrA-3 | PSEBR_a1469 | PSEBR_a4308 | Putative flagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | Regulator of secondary metabolites; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | 0.580 |
| AEA67666.1 | AEA67660.1 | PSEBR_a1471 | PSEBR_a1465 | Putative flagellar hook associated protein (FliD); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-associated protein. | 0.983 |
| AEA67666.1 | AEA67664.1 | PSEBR_a1471 | PSEBR_a1469 | Putative flagellar hook associated protein (FliD); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Putative flagellin protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.987 |
| AEA67666.1 | AEA67667.1 | PSEBR_a1471 | PSEBR_a1472 | Putative flagellar hook associated protein (FliD); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar protein. | 0.991 |
| AEA67666.1 | AEA68701.1 | PSEBR_a1471 | PSEBR_a2422 | Putative flagellar hook associated protein (FliD); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Putative flagellar hook capping protein. | 0.885 |
| AEA67666.1 | csrA | PSEBR_a1471 | PSEBR_a1523 | Putative flagellar hook associated protein (FliD); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Regulator of secondary metabolites; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | 0.497 |
| AEA67666.1 | csrA-2 | PSEBR_a1471 | PSEBR_a3716 | Putative flagellar hook associated protein (FliD); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Regulator of secondary metabolites; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s). | 0.497 |
page 1 of 4