Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEA67330.1 | astB | PSEBR_a1152 | PSEBR_a4315 | Putative amino acid ABC transporter, protein binding component. | N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.413 |
| AEA67330.1 | astD | PSEBR_a1152 | PSEBR_a4316 | Putative amino acid ABC transporter, protein binding component. | Succinylglutamate-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.569 |
| AEA67330.1 | astE | PSEBR_a1152 | PSEBR_a4313 | Putative amino acid ABC transporter, protein binding component. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.521 |
| AEA68072.1 | AEA68073.1 | PSEBR_a1855 | PSEBR_a1856 | Arginine N-succinyltransferase, beta subunit. | Arginine N-succinyltransferase, alpha subunit. | 0.819 |
| AEA68072.1 | AEA69555.1 | PSEBR_a1855 | PSEBR_a3245 | Arginine N-succinyltransferase, beta subunit. | NAD-specific glutamate dehydrogenase. | 0.499 |
| AEA68072.1 | AEA70726.1 | PSEBR_a1855 | PSEBR_a4318 | Arginine N-succinyltransferase, beta subunit. | Arginine N-succinyltransferase, alpha subunit. | 0.576 |
| AEA68072.1 | argD | PSEBR_a1855 | PSEBR_a4319 | Arginine N-succinyltransferase, beta subunit. | Bifunctional protein: Acetylornithine transaminase; Succinyldiaminopimelate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.582 |
| AEA68072.1 | astB | PSEBR_a1855 | PSEBR_a4315 | Arginine N-succinyltransferase, beta subunit. | N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.993 |
| AEA68072.1 | astD | PSEBR_a1855 | PSEBR_a4316 | Arginine N-succinyltransferase, beta subunit. | Succinylglutamate-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.924 |
| AEA68072.1 | astE | PSEBR_a1855 | PSEBR_a4313 | Arginine N-succinyltransferase, beta subunit. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.892 |
| AEA68073.1 | AEA68072.1 | PSEBR_a1856 | PSEBR_a1855 | Arginine N-succinyltransferase, alpha subunit. | Arginine N-succinyltransferase, beta subunit. | 0.819 |
| AEA68073.1 | AEA70725.1 | PSEBR_a1856 | PSEBR_a4317 | Arginine N-succinyltransferase, alpha subunit. | Arginine N-succinyltransferase, beta subunit. | 0.568 |
| AEA68073.1 | argD | PSEBR_a1856 | PSEBR_a4319 | Arginine N-succinyltransferase, alpha subunit. | Bifunctional protein: Acetylornithine transaminase; Succinyldiaminopimelate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.564 |
| AEA68073.1 | astB | PSEBR_a1856 | PSEBR_a4315 | Arginine N-succinyltransferase, alpha subunit. | N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.993 |
| AEA68073.1 | astD | PSEBR_a1856 | PSEBR_a4316 | Arginine N-succinyltransferase, alpha subunit. | Succinylglutamate-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.922 |
| AEA68073.1 | astE | PSEBR_a1856 | PSEBR_a4313 | Arginine N-succinyltransferase, alpha subunit. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.870 |
| AEA69555.1 | AEA68072.1 | PSEBR_a3245 | PSEBR_a1855 | NAD-specific glutamate dehydrogenase. | Arginine N-succinyltransferase, beta subunit. | 0.499 |
| AEA69555.1 | AEA70725.1 | PSEBR_a3245 | PSEBR_a4317 | NAD-specific glutamate dehydrogenase. | Arginine N-succinyltransferase, beta subunit. | 0.502 |
| AEA69555.1 | astB | PSEBR_a3245 | PSEBR_a4315 | NAD-specific glutamate dehydrogenase. | N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.794 |
| AEA69555.1 | astD | PSEBR_a3245 | PSEBR_a4316 | NAD-specific glutamate dehydrogenase. | Succinylglutamate-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.575 |
page 1 of 4