Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA66293.1 | AEA67627.1 | PSEBR_a160 | PSEBR_a1432 | Putative biofilm PNAG synthesis protein. | Conserved hypothetical protein. | 0.709 |
AEA66293.1 | AEA70741.1 | PSEBR_a160 | PSEBR_a4334 | Putative biofilm PNAG synthesis protein. | Conserved hypothetical protein. | 0.501 |
AEA67627.1 | AEA66293.1 | PSEBR_a1432 | PSEBR_a160 | Conserved hypothetical protein. | Putative biofilm PNAG synthesis protein. | 0.709 |
AEA67627.1 | AEA70741.1 | PSEBR_a1432 | PSEBR_a4334 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.435 |
AEA70741.1 | AEA66293.1 | PSEBR_a4334 | PSEBR_a160 | Conserved hypothetical protein. | Putative biofilm PNAG synthesis protein. | 0.501 |
AEA70741.1 | AEA67627.1 | PSEBR_a4334 | PSEBR_a1432 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.435 |
AEA70741.1 | AEA70742.1 | PSEBR_a4334 | PSEBR_a4335 | Conserved hypothetical protein. | Putative transcription factor, AraC family. | 0.701 |
AEA70741.1 | PSEBR_a23 | PSEBR_a4334 | PSEBR_a23 | Conserved hypothetical protein. | Putative oxidoreductase. | 0.561 |
AEA70742.1 | AEA70741.1 | PSEBR_a4335 | PSEBR_a4334 | Putative transcription factor, AraC family. | Conserved hypothetical protein. | 0.701 |
PSEBR_a23 | AEA70741.1 | PSEBR_a23 | PSEBR_a4334 | Putative oxidoreductase. | Conserved hypothetical protein. | 0.561 |