STRINGSTRING
AEA70860.1 AEA70860.1 slyX slyX AEA71979.1 AEA71979.1 AEA71935.1 AEA71935.1 AEA70635.1 AEA70635.1 AEA68672.1 AEA68672.1 rpoC rpoC
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA70860.1Conserved hypothetical protein. (141 aa)    
Predicted Functional Partners:
slyX
Conserved hypothetical protein; Belongs to the SlyX family.
 
    0.906
AEA71979.1
Conserved hypothetical protein; putative lipoprotein.
  
  
 0.558
AEA71935.1
Conserved hypothetical protein.
  
   
 0.498
AEA70635.1
Putative histidine kinase, Hybrid.
 
 
   0.459
AEA68672.1
Putative peptide synthase.
  
 
 0.415
rpoC
DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
 
 
 0.400
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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