Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEA67169.1 | AEA68622.1 | PSEBR_a996 | PSEBR_a2343 | Homoserine dehydrogenase. | Putative acetolactate synthase. | 0.942 |
| AEA67169.1 | AEA68758.1 | PSEBR_a996 | PSEBR_a2478 | Homoserine dehydrogenase. | Putative threonine dehydratase. | 0.861 |
| AEA67169.1 | AEA69831.1 | PSEBR_a996 | PSEBR_a3495 | Homoserine dehydrogenase. | Putative tartrate dehydrogenase/decarboxylase. | 0.916 |
| AEA67169.1 | AEA70914.1 | PSEBR_a996 | PSEBR_a4502 | Homoserine dehydrogenase. | Conserved hypothetical protein; Belongs to the TPP enzyme family. | 0.942 |
| AEA67169.1 | AEA71072.1 | PSEBR_a996 | PSEBR_a4655 | Homoserine dehydrogenase. | Putative threonine ammonia-lyase. | 0.861 |
| AEA67169.1 | AEA71212.1 | PSEBR_a996 | PSEBR_a4793 | Homoserine dehydrogenase. | Acetolactate synthase small subunit. | 0.666 |
| AEA67169.1 | AEA71213.1 | PSEBR_a996 | PSEBR_a4794 | Homoserine dehydrogenase. | Acetolactate synthase large subunit. | 0.948 |
| AEA67169.1 | ilvA-2 | PSEBR_a996 | PSEBR_a3094 | Homoserine dehydrogenase. | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.861 |
| AEA67169.1 | ilvC | PSEBR_a996 | PSEBR_a4792 | Homoserine dehydrogenase. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.960 |
| AEA67169.1 | leuB | PSEBR_a996 | PSEBR_a3865 | Homoserine dehydrogenase. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.916 |
| AEA68622.1 | AEA67169.1 | PSEBR_a2343 | PSEBR_a996 | Putative acetolactate synthase. | Homoserine dehydrogenase. | 0.942 |
| AEA68622.1 | AEA68758.1 | PSEBR_a2343 | PSEBR_a2478 | Putative acetolactate synthase. | Putative threonine dehydratase. | 0.924 |
| AEA68622.1 | AEA69831.1 | PSEBR_a2343 | PSEBR_a3495 | Putative acetolactate synthase. | Putative tartrate dehydrogenase/decarboxylase. | 0.947 |
| AEA68622.1 | AEA70914.1 | PSEBR_a2343 | PSEBR_a4502 | Putative acetolactate synthase. | Conserved hypothetical protein; Belongs to the TPP enzyme family. | 0.930 |
| AEA68622.1 | AEA71072.1 | PSEBR_a2343 | PSEBR_a4655 | Putative acetolactate synthase. | Putative threonine ammonia-lyase. | 0.924 |
| AEA68622.1 | AEA71212.1 | PSEBR_a2343 | PSEBR_a4793 | Putative acetolactate synthase. | Acetolactate synthase small subunit. | 0.982 |
| AEA68622.1 | AEA71213.1 | PSEBR_a2343 | PSEBR_a4794 | Putative acetolactate synthase. | Acetolactate synthase large subunit. | 0.919 |
| AEA68622.1 | ilvA-2 | PSEBR_a2343 | PSEBR_a3094 | Putative acetolactate synthase. | Threonine ammonia-lyase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.924 |
| AEA68622.1 | ilvC | PSEBR_a2343 | PSEBR_a4792 | Putative acetolactate synthase. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.969 |
| AEA68622.1 | leuB | PSEBR_a2343 | PSEBR_a3865 | Putative acetolactate synthase. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.937 |
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