Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA66321.1 | AEA68292.1 | PSEBR_a188 | PSEBR_a2046 | Putative oxidoreductase. | Putative quinoprotein glucose dehydrogenase. | 0.904 |
AEA66321.1 | AEA69324.1 | PSEBR_a188 | PSEBR_a3020 | Putative oxidoreductase. | Phosphoglucomutase. | 0.842 |
AEA66321.1 | AEA69879.1 | PSEBR_a188 | PSEBR_a3540 | Putative oxidoreductase. | Gluconolactonase. | 0.907 |
AEA66321.1 | AEA70564.1 | PSEBR_a188 | PSEBR_a4160 | Putative oxidoreductase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.807 |
AEA66321.1 | AEA70894.1 | PSEBR_a188 | PSEBR_a4482 | Putative oxidoreductase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.807 |
AEA66321.1 | AEA70945.1 | PSEBR_a188 | PSEBR_a4532 | Putative oxidoreductase. | Quinoprotein glucose dehydrogenase. | 0.907 |
AEA66321.1 | AEA71758.1 | PSEBR_a188 | PSEBR_a5265 | Putative oxidoreductase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.800 |
AEA66321.1 | eno | PSEBR_a188 | PSEBR_a1085 | Putative oxidoreductase. | Phosphopyruvate hydratase (enolase); Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. | 0.805 |
AEA66321.1 | glk | PSEBR_a188 | PSEBR_a1209 | Putative oxidoreductase. | Glucokinase: putative membrane protein; Belongs to the bacterial glucokinase family. | 0.830 |
AEA66321.1 | pgi | PSEBR_a188 | PSEBR_a4819 | Putative oxidoreductase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.816 |
AEA68292.1 | AEA66321.1 | PSEBR_a2046 | PSEBR_a188 | Putative quinoprotein glucose dehydrogenase. | Putative oxidoreductase. | 0.904 |
AEA68292.1 | AEA69324.1 | PSEBR_a2046 | PSEBR_a3020 | Putative quinoprotein glucose dehydrogenase. | Phosphoglucomutase. | 0.810 |
AEA68292.1 | AEA69879.1 | PSEBR_a2046 | PSEBR_a3540 | Putative quinoprotein glucose dehydrogenase. | Gluconolactonase. | 0.932 |
AEA68292.1 | AEA70564.1 | PSEBR_a2046 | PSEBR_a4160 | Putative quinoprotein glucose dehydrogenase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.809 |
AEA68292.1 | AEA70894.1 | PSEBR_a2046 | PSEBR_a4482 | Putative quinoprotein glucose dehydrogenase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.809 |
AEA68292.1 | AEA70945.1 | PSEBR_a2046 | PSEBR_a4532 | Putative quinoprotein glucose dehydrogenase. | Quinoprotein glucose dehydrogenase. | 0.911 |
AEA68292.1 | AEA71758.1 | PSEBR_a2046 | PSEBR_a5265 | Putative quinoprotein glucose dehydrogenase. | Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. | 0.811 |
AEA68292.1 | eno | PSEBR_a2046 | PSEBR_a1085 | Putative quinoprotein glucose dehydrogenase. | Phosphopyruvate hydratase (enolase); Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. | 0.811 |
AEA68292.1 | glk | PSEBR_a2046 | PSEBR_a1209 | Putative quinoprotein glucose dehydrogenase. | Glucokinase: putative membrane protein; Belongs to the bacterial glucokinase family. | 0.822 |
AEA68292.1 | pgi | PSEBR_a2046 | PSEBR_a4819 | Putative quinoprotein glucose dehydrogenase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.818 |
page 1 of 5