Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA66279.1 | AEA70711.1 | PSEBR_a147 | PSEBR_a4303 | Conserved hypothetical protein. | Putative DNA-binding protein. | 0.765 |
AEA66279.1 | AEA71005.1 | PSEBR_a147 | PSEBR_a4591 | Conserved hypothetical protein. | Putative alginate biosynthesis protein (Glycosyltransferase). | 0.642 |
AEA66279.1 | AEA71007.1 | PSEBR_a147 | PSEBR_a4593 | Conserved hypothetical protein. | Putative alginate biosynthesis protein AlgK. | 0.770 |
AEA66279.1 | AEA71009.1 | PSEBR_a147 | PSEBR_a4595 | Conserved hypothetical protein. | Putative poly(beta-D-mannuronate) C5 epimerase. | 0.771 |
AEA66279.1 | AEA71010.1 | PSEBR_a147 | PSEBR_a4596 | Conserved hypothetical protein. | Putative alginate biosynthesis protein. | 0.764 |
AEA66279.1 | AEA71013.1 | PSEBR_a147 | PSEBR_a4599 | Conserved hypothetical protein. | Putative alginate biosynthesis protein AlgJ. | 0.720 |
AEA66279.1 | algL | PSEBR_a147 | PSEBR_a4597 | Conserved hypothetical protein. | Poly(beta-D-mannuronate) lyase (alginate lyase); Catalyzes the depolymerization of alginate by cleaving the beta-1,4 glycosidic bond between two adjacent sugar residues via a beta-elimination mechanism. May serve to degrade mislocalized alginate that is trapped in the periplasmic space. | 0.757 |
AEA70711.1 | AEA66279.1 | PSEBR_a4303 | PSEBR_a147 | Putative DNA-binding protein. | Conserved hypothetical protein. | 0.765 |
AEA70711.1 | AEA71005.1 | PSEBR_a4303 | PSEBR_a4591 | Putative DNA-binding protein. | Putative alginate biosynthesis protein (Glycosyltransferase). | 0.738 |
AEA70711.1 | AEA71007.1 | PSEBR_a4303 | PSEBR_a4593 | Putative DNA-binding protein. | Putative alginate biosynthesis protein AlgK. | 0.773 |
AEA70711.1 | AEA71009.1 | PSEBR_a4303 | PSEBR_a4595 | Putative DNA-binding protein. | Putative poly(beta-D-mannuronate) C5 epimerase. | 0.774 |
AEA70711.1 | AEA71010.1 | PSEBR_a4303 | PSEBR_a4596 | Putative DNA-binding protein. | Putative alginate biosynthesis protein. | 0.773 |
AEA70711.1 | AEA71013.1 | PSEBR_a4303 | PSEBR_a4599 | Putative DNA-binding protein. | Putative alginate biosynthesis protein AlgJ. | 0.763 |
AEA70711.1 | algL | PSEBR_a4303 | PSEBR_a4597 | Putative DNA-binding protein. | Poly(beta-D-mannuronate) lyase (alginate lyase); Catalyzes the depolymerization of alginate by cleaving the beta-1,4 glycosidic bond between two adjacent sugar residues via a beta-elimination mechanism. May serve to degrade mislocalized alginate that is trapped in the periplasmic space. | 0.777 |
AEA71005.1 | AEA66279.1 | PSEBR_a4591 | PSEBR_a147 | Putative alginate biosynthesis protein (Glycosyltransferase). | Conserved hypothetical protein. | 0.642 |
AEA71005.1 | AEA70711.1 | PSEBR_a4591 | PSEBR_a4303 | Putative alginate biosynthesis protein (Glycosyltransferase). | Putative DNA-binding protein. | 0.738 |
AEA71005.1 | AEA71006.1 | PSEBR_a4591 | PSEBR_a4592 | Putative alginate biosynthesis protein (Glycosyltransferase). | Putative alginate biosynthesis protein Alg44. | 0.992 |
AEA71005.1 | AEA71007.1 | PSEBR_a4591 | PSEBR_a4593 | Putative alginate biosynthesis protein (Glycosyltransferase). | Putative alginate biosynthesis protein AlgK. | 0.982 |
AEA71005.1 | AEA71008.1 | PSEBR_a4591 | PSEBR_a4594 | Putative alginate biosynthesis protein (Glycosyltransferase). | Putative alginate production protein. | 0.929 |
AEA71005.1 | AEA71009.1 | PSEBR_a4591 | PSEBR_a4595 | Putative alginate biosynthesis protein (Glycosyltransferase). | Putative poly(beta-D-mannuronate) C5 epimerase. | 0.997 |
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