STRINGSTRING
PSEBR_a46 PSEBR_a46 PSEBR_a47 PSEBR_a47 PSEBR_a44 PSEBR_a44 PSEBR_a45 PSEBR_a45 PSEBR_a43 PSEBR_a43 pncB pncB pncB-2 pncB-2 AEA70335.1 AEA70335.1 AEA67269.1 AEA67269.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEBR_a46Putative N-acetylmuramoyl-L-alanine amidase. (259 aa)    
Predicted Functional Partners:
PSEBR_a47
Putative c-di-GMP phosphodiesterase.
       0.616
PSEBR_a44
Putative endonuclease/exonuclease/phosphatase.
       0.575
PSEBR_a45
Putative diguanylate cyclase.
       0.575
PSEBR_a43
Thiol:disulfide interchange protein.
       0.553
pncB
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
  
     0.474
pncB-2
Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.
  
     0.461
AEA70335.1
Xaa-Pro aminopeptidase.
  
    0.418
AEA67269.1
Putative lipoprotein.
 
   
 0.408
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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