Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA70972.1 | AEA71048.1 | PSEBR_a4558 | PSEBR_a4632 | Putative permease. | Putative lipoprotein. | 0.538 |
AEA70972.1 | bamE | PSEBR_a4558 | PSEBR_a760 | Putative permease. | Putative outer membrane lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.433 |
AEA70972.1 | lolA | PSEBR_a4558 | PSEBR_a3562 | Putative permease. | Conserved hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.566 |
AEA70972.1 | lolB | PSEBR_a4558 | PSEBR_a4761 | Putative permease. | Outer-membrane lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.725 |
AEA71048.1 | AEA70972.1 | PSEBR_a4632 | PSEBR_a4558 | Putative lipoprotein. | Putative permease. | 0.538 |
AEA71048.1 | AEA71179.1 | PSEBR_a4632 | PSEBR_a4760 | Putative lipoprotein. | Conserved hypothetical protein. | 0.448 |
AEA71048.1 | AEA71991.1 | PSEBR_a4632 | PSEBR_a5474 | Putative lipoprotein. | Putative heme biosynthesis protein. | 0.593 |
AEA71048.1 | ftsL | PSEBR_a4632 | PSEBR_a4628 | Putative lipoprotein. | Putative cell division protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | 0.536 |
AEA71048.1 | lolB | PSEBR_a4632 | PSEBR_a4761 | Putative lipoprotein. | Outer-membrane lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.720 |
AEA71179.1 | AEA71048.1 | PSEBR_a4760 | PSEBR_a4632 | Conserved hypothetical protein. | Putative lipoprotein. | 0.448 |
AEA71179.1 | ispE | PSEBR_a4760 | PSEBR_a4762 | Conserved hypothetical protein. | 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.840 |
AEA71179.1 | lolA | PSEBR_a4760 | PSEBR_a3562 | Conserved hypothetical protein. | Conserved hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.404 |
AEA71179.1 | lolB | PSEBR_a4760 | PSEBR_a4761 | Conserved hypothetical protein. | Outer-membrane lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.872 |
AEA71991.1 | AEA71048.1 | PSEBR_a5474 | PSEBR_a4632 | Putative heme biosynthesis protein. | Putative lipoprotein. | 0.593 |
AEA71991.1 | lolB | PSEBR_a5474 | PSEBR_a4761 | Putative heme biosynthesis protein. | Outer-membrane lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.706 |
bamE | AEA70972.1 | PSEBR_a760 | PSEBR_a4558 | Putative outer membrane lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Putative permease. | 0.433 |
bamE | lolA | PSEBR_a760 | PSEBR_a3562 | Putative outer membrane lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Conserved hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.738 |
bamE | lolB | PSEBR_a760 | PSEBR_a4761 | Putative outer membrane lipoprotein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Outer-membrane lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.694 |
ftsL | AEA71048.1 | PSEBR_a4628 | PSEBR_a4632 | Putative cell division protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | Putative lipoprotein. | 0.536 |
ftsL | lolB | PSEBR_a4628 | PSEBR_a4761 | Putative cell division protein; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. | Outer-membrane lipoprotein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.670 |
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