STRINGSTRING
AEA66630.1 AEA66630.1 AEA66631.1 AEA66631.1 AEA66632.1 AEA66632.1 AEA66633.1 AEA66633.1 AEA66657.1 AEA66657.1 AEA66635.1 AEA66635.1 AEA66636.1 AEA66636.1 PSEBR_a10 PSEBR_a10 hldE hldE AEA66634.1 AEA66634.1 gmhA gmhA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEA66630.1ADP-heptose--LPS heptosyltransferase II. (344 aa)    
Predicted Functional Partners:
AEA66631.1
Lipopolysaccharide heptosyltransferase-1.
 
0.997
AEA66632.1
Lipopolysaccharide core biosynthesis protein.
 
 
 0.991
AEA66633.1
Lipopolysaccharide core biosynthesis protein; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
 
 
 0.990
AEA66657.1
3-deoxy-d-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
 
  
 0.965
AEA66635.1
Putative lipopolysaccharide core biosynthesis protein.
 
 
 0.927
AEA66636.1
Conserved hypothetical protein.
 
 
 0.922
PSEBR_a10
DD-heptose 17-bisphosphate phosphatase.
   
 0.878
hldE
Putative bifunctional protein: D-beta-D-heptose 7-phosphate kinase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.
 
  
 0.862
AEA66634.1
Putative lipopolysaccharide core biosynthesis protein.
 
     0.843
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.
 
   
 0.834
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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