STRINGSTRING
AEA71311.1 AEA71311.1 AEA70088.1 AEA70088.1 AEA70089.1 AEA70089.1 AEA70090.1 AEA70090.1 AEA71310.1 AEA71310.1 AEA67431.1 AEA67431.1 AEA67006.1 AEA67006.1 hfq hfq AEA71923.1 AEA71923.1 AEA69737.1 AEA69737.1 AEA70803.1 AEA70803.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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[Homology]
Score
AEA71311.1Catalase; Belongs to the catalase family. (513 aa)    
Predicted Functional Partners:
AEA70088.1
Glycolate oxidase, subunit D.
   
 0.913
AEA70089.1
Glycolate oxidase, subunit E.
   
 0.913
AEA70090.1
Glycolate oxidase (iron-sulfur), subunit F.
     
  0.900
AEA71310.1
Conserved hypothetical protein.
 
 
 0.687
AEA67431.1
Superoxide dismutase (Fe); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 0.608
AEA67006.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
 0.608
hfq
RNA-binding protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.
    
 
 0.562
AEA71923.1
Putative oxidoreductase.
  
 
 0.498
AEA69737.1
Peroxiredoxin (Alkyl hydroperoxide reductase, subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
  
 
 0.497
AEA70803.1
Putative peroxiredoxin.
  
 
 0.497
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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