STRINGSTRING
AEA71352.1 AEA71352.1 AEA71353.1 AEA71353.1 AEA71868.1 AEA71868.1 AEA69744.1 AEA69744.1 AEA71926.1 AEA71926.1 lptE lptE AEA66634.1 AEA66634.1 AEA66640.1 AEA66640.1 AEA66661.1 AEA66661.1 AEA69692.1 AEA69692.1 AEA71351.1 AEA71351.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA71352.1Conserved hypothetical protein. (139 aa)    
Predicted Functional Partners:
AEA71353.1
Putative cation transport membrane protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
     
 0.794
AEA71868.1
Conserved hypothetical protein.
  
     0.722
AEA69744.1
Conserved hypothetical protein.
  
     0.694
AEA71926.1
Putative outer membrane porin, OprD family.
  
     0.640
lptE
Putative lipoprotein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.
  
     0.611
AEA66634.1
Putative lipopolysaccharide core biosynthesis protein.
  
     0.603
AEA66640.1
Conserved hypothetical protein.
  
     0.602
AEA66661.1
Putative lipoprotein.
  
     0.598
AEA69692.1
Putative porin.
  
     0.595
AEA71351.1
Putative ATP-dependent RNA helicase.
       0.594
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.