Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA66592.1 | AEA66593.1 | PSEBR_a448 | PSEBR_a449 | Conserved hypothetical protein. | Conserved hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.956 |
AEA66592.1 | AEA71417.1 | PSEBR_a448 | PSEBR_a4990 | Conserved hypothetical protein. | Putative regulatory protein; Belongs to the peptidase S24 family. | 0.487 |
AEA66593.1 | AEA66592.1 | PSEBR_a449 | PSEBR_a448 | Conserved hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Conserved hypothetical protein. | 0.956 |
AEA66593.1 | AEA71417.1 | PSEBR_a449 | PSEBR_a4990 | Conserved hypothetical protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Putative regulatory protein; Belongs to the peptidase S24 family. | 0.490 |
AEA66886.1 | AEA71417.1 | PSEBR_cmegm19 | PSEBR_a4990 | Putative transcription factor, Cro/Ci family. | Putative regulatory protein; Belongs to the peptidase S24 family. | 0.483 |
AEA67289.1 | AEA70191.1 | PSEBR_a1113 | PSEBR_a3820 | Putative phage tail protein; putative baseplate J-like protein. | Putative phage terminase protein. | 0.515 |
AEA67289.1 | AEA71417.1 | PSEBR_a1113 | PSEBR_a4990 | Putative phage tail protein; putative baseplate J-like protein. | Putative regulatory protein; Belongs to the peptidase S24 family. | 0.493 |
AEA68059.1 | AEA70188.1 | PSEBR_a1841 | PSEBR_a3818 | Putative phage repressor. | Putative phage protein. | 0.514 |
AEA68059.1 | AEA71417.1 | PSEBR_a1841 | PSEBR_a4990 | Putative phage repressor. | Putative regulatory protein; Belongs to the peptidase S24 family. | 0.474 |
AEA68059.1 | recA | PSEBR_a1841 | PSEBR_a1123 | Putative phage repressor. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.909 |
AEA69127.1 | AEA70188.1 | PSEBR_a2827 | PSEBR_a3818 | Triacylglycerol lipase. | Putative phage protein. | 0.813 |
AEA69127.1 | AEA71417.1 | PSEBR_a2827 | PSEBR_a4990 | Triacylglycerol lipase. | Putative regulatory protein; Belongs to the peptidase S24 family. | 0.488 |
AEA70188.1 | AEA68059.1 | PSEBR_a3818 | PSEBR_a1841 | Putative phage protein. | Putative phage repressor. | 0.514 |
AEA70188.1 | AEA69127.1 | PSEBR_a3818 | PSEBR_a2827 | Putative phage protein. | Triacylglycerol lipase. | 0.813 |
AEA70188.1 | AEA70191.1 | PSEBR_a3818 | PSEBR_a3820 | Putative phage protein. | Putative phage terminase protein. | 0.862 |
AEA70188.1 | AEA71417.1 | PSEBR_a3818 | PSEBR_a4990 | Putative phage protein. | Putative regulatory protein; Belongs to the peptidase S24 family. | 0.588 |
AEA70191.1 | AEA67289.1 | PSEBR_a3820 | PSEBR_a1113 | Putative phage terminase protein. | Putative phage tail protein; putative baseplate J-like protein. | 0.515 |
AEA70191.1 | AEA70188.1 | PSEBR_a3820 | PSEBR_a3818 | Putative phage terminase protein. | Putative phage protein. | 0.862 |
AEA70191.1 | AEA71417.1 | PSEBR_a3820 | PSEBR_a4990 | Putative phage terminase protein. | Putative regulatory protein; Belongs to the peptidase S24 family. | 0.475 |
AEA71417.1 | AEA66592.1 | PSEBR_a4990 | PSEBR_a448 | Putative regulatory protein; Belongs to the peptidase S24 family. | Conserved hypothetical protein. | 0.487 |
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