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AEA71483.1 AEA71483.1 AEA70099.1 AEA70099.1 AEA69233.1 AEA69233.1 AEA69739.1 AEA69739.1 AEA71484.1 AEA71484.1 AEA70105.1 AEA70105.1 AEA66642.1 AEA66642.1 AEA71004.1 AEA71004.1 rpsN rpsN rpsS rpsS rpsL rpsL
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AEA71483.1Putative NAD-dependent lipopolysaccharide biosynthesis-related epimerase/dehydratase. (309 aa)    
Predicted Functional Partners:
AEA70099.1
UDP-glucose 6-dehydrogenase.
 
 0.947
AEA69233.1
Putative nucleotide-sugar dehydrogenase.
 
 0.946
AEA69739.1
UTP--glucose-1-phosphate uridylyltransferase.
 
 
 0.927
AEA71484.1
Putative dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
  
 
 0.861
AEA70105.1
Glycosyl transferase, family 1.
 
  
 0.725
AEA66642.1
Putative glycosyl transferase.
 
  
 0.670
AEA71004.1
GDP-mannose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.659
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
   
  0.656
rpsS
30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
   
  0.655
rpsL
30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
   
 0.654
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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