STRINGSTRING
potA potA AEA71578.1 AEA71578.1 AEA71577.1 AEA71577.1 AEA71576.1 AEA71576.1 AEA69069.1 AEA69069.1 AEA68050.1 AEA68050.1 AEA69070.1 AEA69070.1 AEA68049.1 AEA68049.1 AEA70910.1 AEA70910.1 AEA69010.1 AEA69010.1 AEA70911.1 AEA70911.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
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[Homology]
Score
potAPutative ABC transporter, ATP-binding component; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (374 aa)    
Predicted Functional Partners:
AEA71578.1
Putative ABC transporter, periplasmic component.
 
  
 0.917
AEA71577.1
Putative ABC transporter, permease component.
 
 
 0.910
AEA71576.1
Putative ABC transporter, permease component.
  
 0.899
AEA69069.1
Putative polyamine ABC transporter permease component.
  
 0.838
AEA68050.1
Putative ABC transporter, permease component.
 
 
 0.814
AEA69070.1
Putative polyamine ABC transporter permease component.
 
 
 0.814
AEA68049.1
Putative ABC transporter, permease component.
 
  
 0.810
AEA70910.1
Putative Spermidine/putrescine ABC transporter, permease component.
 
  
 0.792
AEA69010.1
Conserved hypothetical protein.
 
  
 0.787
AEA70911.1
Putative Spermidine/putrescine ABC transporter, permease component.
 
 
 0.776
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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