Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA66275.1 | AEA70857.1 | PSEBR_a143 | PSEBR_a4446 | Conserved hypothetical protein. | Putative DNA-binding ferritin-like protein, DPS family; Belongs to the Dps family. | 0.701 |
AEA66275.1 | AEA71594.1 | PSEBR_a143 | PSEBR_a5142 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.673 |
AEA68106.1 | AEA71594.1 | PSEBR_a1886 | PSEBR_a5142 | Putative oxidoreductase. | Conserved hypothetical protein. | 0.740 |
AEA70857.1 | AEA66275.1 | PSEBR_a4446 | PSEBR_a143 | Putative DNA-binding ferritin-like protein, DPS family; Belongs to the Dps family. | Conserved hypothetical protein. | 0.701 |
AEA70857.1 | AEA71594.1 | PSEBR_a4446 | PSEBR_a5142 | Putative DNA-binding ferritin-like protein, DPS family; Belongs to the Dps family. | Conserved hypothetical protein. | 0.631 |
AEA71593.1 | AEA71594.1 | PSEBR_m1602 | PSEBR_a5142 | Hypothetical protein. | Conserved hypothetical protein. | 0.636 |
AEA71593.1 | AEA71595.1 | PSEBR_m1602 | PSEBR_a5143 | Hypothetical protein. | Conserved hypothetical protein; Belongs to the UPF0229 family. | 0.429 |
AEA71593.1 | AEA71596.1 | PSEBR_m1602 | PSEBR_a5144 | Hypothetical protein. | Conserved hypothetical protein. | 0.429 |
AEA71593.1 | apaG | PSEBR_m1602 | PSEBR_a5139 | Hypothetical protein. | Conserved hypothetical protein. | 0.546 |
AEA71593.1 | glpE | PSEBR_m1602 | PSEBR_a5141 | Hypothetical protein. | Putative thiosulfate sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide. | 0.631 |
AEA71594.1 | AEA66275.1 | PSEBR_a5142 | PSEBR_a143 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.673 |
AEA71594.1 | AEA68106.1 | PSEBR_a5142 | PSEBR_a1886 | Conserved hypothetical protein. | Putative oxidoreductase. | 0.740 |
AEA71594.1 | AEA70857.1 | PSEBR_a5142 | PSEBR_a4446 | Conserved hypothetical protein. | Putative DNA-binding ferritin-like protein, DPS family; Belongs to the Dps family. | 0.631 |
AEA71594.1 | AEA71593.1 | PSEBR_a5142 | PSEBR_m1602 | Conserved hypothetical protein. | Hypothetical protein. | 0.636 |
AEA71594.1 | AEA71595.1 | PSEBR_a5142 | PSEBR_a5143 | Conserved hypothetical protein. | Conserved hypothetical protein; Belongs to the UPF0229 family. | 0.989 |
AEA71594.1 | AEA71596.1 | PSEBR_a5142 | PSEBR_a5144 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.989 |
AEA71594.1 | apaG | PSEBR_a5142 | PSEBR_a5139 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.545 |
AEA71594.1 | cca | PSEBR_a5142 | PSEBR_a5145 | Conserved hypothetical protein. | Putative tRNA cytidylyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. | 0.613 |
AEA71594.1 | glgA | PSEBR_a5142 | PSEBR_a3006 | Conserved hypothetical protein. | Starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.748 |
AEA71594.1 | glpE | PSEBR_a5142 | PSEBR_a5141 | Conserved hypothetical protein. | Putative thiosulfate sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide. | 0.601 |
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