STRINGSTRING
AEA71596.1 AEA71596.1 AEA71595.1 AEA71595.1 AEA71594.1 AEA71594.1 AEA67478.1 AEA67478.1 cca cca PSEBR_a53 PSEBR_a53 AEA67545.1 AEA67545.1 trpS trpS AEA71110.1 AEA71110.1 AEA66514.1 AEA66514.1 AEA69140.1 AEA69140.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA71596.1Conserved hypothetical protein. (521 aa)    
Predicted Functional Partners:
AEA71595.1
Conserved hypothetical protein; Belongs to the UPF0229 family.
 
  
 0.994
AEA71594.1
Conserved hypothetical protein.
 
  
 0.989
AEA67478.1
Conserved hypothetical protein.
   
  
 0.756
cca
Putative tRNA cytidylyltransferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.
     
 0.658
PSEBR_a53
Conserved hypothetical protein.
  
  
 0.531
AEA67545.1
Conserved hypothetical protein.
   
  
 0.527
trpS
Tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.527
AEA71110.1
Putative Glutamate/Leucine/Phenylalanine/Valine dehydrogenase.
   
    0.513
AEA66514.1
Putative lipoprotein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.
   
  
 0.488
AEA69140.1
Conserved hypothetical protein, membrane protein.
   
  
 0.476
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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