Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA71472.1 | AEA71635.1 | PSEBR_a5040 | PSEBR_a5165 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Putative coenzyme PQQ biosynthesis-related protein; Belongs to the peptidase M16 family. | 0.427 |
AEA71633.1 | AEA71634.1 | PSEBR_a5163 | PSEBR_a5164 | Putative oxidoreductase. | Putative hydrolase. | 0.991 |
AEA71633.1 | AEA71635.1 | PSEBR_a5163 | PSEBR_a5165 | Putative oxidoreductase. | Putative coenzyme PQQ biosynthesis-related protein; Belongs to the peptidase M16 family. | 0.637 |
AEA71634.1 | AEA71633.1 | PSEBR_a5164 | PSEBR_a5163 | Putative hydrolase. | Putative oxidoreductase. | 0.991 |
AEA71634.1 | AEA71635.1 | PSEBR_a5164 | PSEBR_a5165 | Putative hydrolase. | Putative coenzyme PQQ biosynthesis-related protein; Belongs to the peptidase M16 family. | 0.667 |
AEA71635.1 | AEA71472.1 | PSEBR_a5165 | PSEBR_a5040 | Putative coenzyme PQQ biosynthesis-related protein; Belongs to the peptidase M16 family. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.427 |
AEA71635.1 | AEA71633.1 | PSEBR_a5165 | PSEBR_a5163 | Putative coenzyme PQQ biosynthesis-related protein; Belongs to the peptidase M16 family. | Putative oxidoreductase. | 0.637 |
AEA71635.1 | AEA71634.1 | PSEBR_a5165 | PSEBR_a5164 | Putative coenzyme PQQ biosynthesis-related protein; Belongs to the peptidase M16 family. | Putative hydrolase. | 0.667 |
AEA71635.1 | AEA71638.1 | PSEBR_a5165 | PSEBR_a5168 | Putative coenzyme PQQ biosynthesis-related protein; Belongs to the peptidase M16 family. | Coenzyme PQQ synthesis protein D. | 0.480 |
AEA71635.1 | AEA71640.1 | PSEBR_a5165 | PSEBR_a5170 | Putative coenzyme PQQ biosynthesis-related protein; Belongs to the peptidase M16 family. | Putative peptidase. | 0.569 |
AEA71635.1 | PSEBR_a59 | PSEBR_a5165 | PSEBR_a59 | Putative coenzyme PQQ biosynthesis-related protein; Belongs to the peptidase M16 family. | Putative peptidase. | 0.411 |
AEA71635.1 | pqqB-2 | PSEBR_a5165 | PSEBR_a5166 | Putative coenzyme PQQ biosynthesis-related protein; Belongs to the peptidase M16 family. | Coenzyme PQQ synthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family. | 0.557 |
AEA71635.1 | pqqC-2 | PSEBR_a5165 | PSEBR_a5167 | Putative coenzyme PQQ biosynthesis-related protein; Belongs to the peptidase M16 family. | Pyrroloquinoline-quinone synthase; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ. | 0.474 |
AEA71635.1 | pqqE-2 | PSEBR_a5165 | PSEBR_a5169 | Putative coenzyme PQQ biosynthesis-related protein; Belongs to the peptidase M16 family. | Coenzyme PQQ synthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ). | 0.437 |
AEA71638.1 | AEA71635.1 | PSEBR_a5168 | PSEBR_a5165 | Coenzyme PQQ synthesis protein D. | Putative coenzyme PQQ biosynthesis-related protein; Belongs to the peptidase M16 family. | 0.480 |
AEA71638.1 | AEA71640.1 | PSEBR_a5168 | PSEBR_a5170 | Coenzyme PQQ synthesis protein D. | Putative peptidase. | 0.851 |
AEA71638.1 | pqqB-2 | PSEBR_a5168 | PSEBR_a5166 | Coenzyme PQQ synthesis protein D. | Coenzyme PQQ synthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family. | 0.950 |
AEA71638.1 | pqqC-2 | PSEBR_a5168 | PSEBR_a5167 | Coenzyme PQQ synthesis protein D. | Pyrroloquinoline-quinone synthase; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ. | 0.976 |
AEA71638.1 | pqqE-2 | PSEBR_a5168 | PSEBR_a5169 | Coenzyme PQQ synthesis protein D. | Coenzyme PQQ synthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ). | 0.965 |
AEA71640.1 | AEA71635.1 | PSEBR_a5170 | PSEBR_a5165 | Putative peptidase. | Putative coenzyme PQQ biosynthesis-related protein; Belongs to the peptidase M16 family. | 0.569 |
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