STRINGSTRING
AEA71669.1 AEA71669.1 AEA71668.1 AEA71668.1 AEA71671.1 AEA71671.1 AEA68142.1 AEA68142.1 AEA66328.1 AEA66328.1 AEA69253.1 AEA69253.1 AEA67872.1 AEA67872.1 AEA69548.1 AEA69548.1 AEA70297.1 AEA70297.1 AEA67385.1 AEA67385.1 AEA68144.1 AEA68144.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
AEA71669.1Putative anti-sigma factor. (324 aa)    
Predicted Functional Partners:
AEA71668.1
Putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.966
AEA71671.1
Putative TonB-dependent siderophore receptor.
 
 
 0.868
AEA68142.1
Putative sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.841
AEA66328.1
Putative sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.841
AEA69253.1
Putative heme uptake regulator; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.841
AEA67872.1
RNA polymerase sigma factor PvdS; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.832
AEA69548.1
Putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.831
AEA70297.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.829
AEA67385.1
Putative ECF sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
 
 0.810
AEA68144.1
Putative TonB-dependent siderophore receptor.
 
 
 0.785
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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