STRINGSTRING
AEA71679.1 AEA71679.1 AEA71678.1 AEA71678.1 PSEBR_a8 PSEBR_a8 AEA69619.1 AEA69619.1 AEA69195.1 AEA69195.1 AEA68592.1 AEA68592.1 AEA71029.1 AEA71029.1 AEA70295.1 AEA70295.1 AEA69998.1 AEA69998.1 AEA69717.1 AEA69717.1 AEA70515.1 AEA70515.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA71679.1Putative response regulator, OmpR family. (226 aa)    
Predicted Functional Partners:
AEA71678.1
Putative histidine kinase, classic.
 
 0.996
PSEBR_a8
Putative histidine kinase, Classic.
 
 
 0.819
AEA69619.1
Putative Histidine kinase, Classic.
 
 
 0.804
AEA69195.1
Putative two-component system, sensor kinase; Member of a two-component regulatory system.
 
 
 0.802
AEA68592.1
Putative histidine kinase, Classic.
 
 
 0.797
AEA71029.1
Putative two-component system, sensor kinase; Member of a two-component regulatory system.
 
 
 0.792
AEA70295.1
Putative Histidine kinase, Unorthodox.
 
 
 0.791
AEA69998.1
Putative Histidine kinase, Classic.
 
 
 0.780
AEA69717.1
Putative Histidine kinase, Classic.
 
 
 0.775
AEA70515.1
Putative histidine kinase, Classic.
 
 
 0.773
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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