STRINGSTRING
AEA71680.1 AEA71680.1 rimK rimK AEA70356.1 AEA70356.1 AEA70357.1 AEA70357.1 AEA71678.1 AEA71678.1 AEA71679.1 AEA71679.1 AEA71681.1 AEA71681.1 AEA71676.1 AEA71676.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA71680.1Conserved hypothetical protein. (168 aa)    
Predicted Functional Partners:
rimK
Ribosomal protein S6 modification protein; Belongs to the RimK family.
 
     0.775
AEA70356.1
Conserved hypothetical protein.
 
    0.706
AEA70357.1
Putative alpha-L-glutamate ligase; putative Ribosomal protein S6 modification protein (C-TERM).
 
     0.680
AEA71678.1
Putative histidine kinase, classic.
       0.644
AEA71679.1
Putative response regulator, OmpR family.
       0.644
AEA71681.1
Putative acyltransferase.
       0.563
AEA71676.1
Conserved hypothetical protein.
       0.413
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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