STRINGSTRING
AEA71689.1 AEA71689.1 AEA71691.1 AEA71691.1 AEA71690.1 AEA71690.1 AEA71692.1 AEA71692.1 AEA68479.1 AEA68479.1 AEA68480.1 AEA68480.1 AEA71710.1 AEA71710.1 AEA71711.1 AEA71711.1 gcvP gcvP AEA68478.1 AEA68478.1 AEA71712.1 AEA71712.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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[Homology]
Score
AEA71689.1Sarcosine oxidase, gamma subunit. (210 aa)    
Predicted Functional Partners:
AEA71691.1
Sarcosine oxidase, delta subunit.
 
 
 0.992
AEA71690.1
Sarcosine oxidase, alpha subunit; Belongs to the GcvT family.
 
 
 0.983
AEA71692.1
Sarcosine oxidase, beta subunit.
 
 
 0.972
AEA68479.1
Sarcosine oxidase, delta subunit.
 
 
 0.956
AEA68480.1
Sarcosine oxidase, beta subunit.
 
 
 0.947
AEA71710.1
Putative oxidoreductase.
 
 
 0.937
AEA71711.1
Conserved hypothetical protein.
 
    0.932
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.915
AEA68478.1
Sarcosine oxidase, alpha subunit; Belongs to the GcvT family.
 
 
 0.909
AEA71712.1
Putative dipeptidase.
 
    0.899
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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