STRINGSTRING
AEA71751.1 AEA71751.1 AEA72164.1 AEA72164.1 AEA72165.1 AEA72165.1 AEA66591.1 AEA66591.1 AEA70899.1 AEA70899.1 AEA66852.1 AEA66852.1 AEA71009.1 AEA71009.1 AEA71007.1 AEA71007.1 AEA70883.1 AEA70883.1 AEA71013.1 AEA71013.1 AEA71242.1 AEA71242.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA71751.1Putative alginate lyase. (223 aa)    
Predicted Functional Partners:
AEA72164.1
Conserved hypothetical protein.
 
  
 0.790
AEA72165.1
Conserved hypothetical protein.
 
  
 0.788
AEA66591.1
Conserved hypothetical protein.
  
     0.764
AEA70899.1
Putative toxin.
  
  
 0.759
AEA66852.1
Putative toxin.
  
  
 0.740
AEA71009.1
Putative poly(beta-D-mannuronate) C5 epimerase.
 
  
 0.737
AEA71007.1
Putative alginate biosynthesis protein AlgK.
 
  
 0.699
AEA70883.1
Conserved hypothetical protein.
  
     0.684
AEA71013.1
Putative alginate biosynthesis protein AlgJ.
 
  
 0.677
AEA71242.1
Conserved hypothetical protein.
  
     0.658
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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