STRINGSTRING
mdcB mdcB AEA71798.1 AEA71798.1 mdcC mdcC AEA71799.1 AEA71799.1 AEA71803.1 AEA71803.1 AEA71800.1 AEA71800.1 AEA71797.1 AEA71797.1 AEA71796.1 AEA71796.1 AEA71795.1 AEA71795.1 AEA71794.1 AEA71794.1 accD accD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
mdcBPutative triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family. (291 aa)    
Predicted Functional Partners:
AEA71798.1
Putative phosphoribosyl-dephospho-CoA transferase.
 
 
 0.994
mdcC
Putative malonate decarboxylase, acyl-carrier protein; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.
 
  
 0.994
AEA71799.1
Putative malonate decarboxylase, gamma subunit.
 
  
 0.981
AEA71803.1
Putative malonate decarboxylase, alpha subunit.
  
 0.975
AEA71800.1
Putative malonate decarboxylase, beta subunit.
 
  
 0.968
AEA71797.1
Putative [Acyl-carrier-protein] S-malonyltransferase.
 
    0.951
AEA71796.1
Putative malonate transporter, MadL subunit.
 
    0.925
AEA71795.1
Putative malonate transporter, MadM subunit.
 
     0.840
AEA71794.1
Putative transcription regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.695
accD
Acetyl-CoA carboxylase; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
  
 0.437
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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