STRINGSTRING
AEA71805.1 AEA71805.1 AEA71806.1 AEA71806.1 AEA71808.1 AEA71808.1 AEA71811.1 AEA71811.1 AEA71810.1 AEA71810.1 AEA71809.1 AEA71809.1 AEA67193.1 AEA67193.1 AEA71807.1 AEA71807.1 AEA71946.1 AEA71946.1 AEA72012.1 AEA72012.1 PSEBR_a96 PSEBR_a96
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA71805.1Putative signal transducer, CheW. (160 aa)    
Predicted Functional Partners:
AEA71806.1
Putative histidine kinase, CheA.
 
 0.998
AEA71808.1
Putative methyl accepting chemotaxis-related protein.
 
  0.993
AEA71811.1
Putative response regulator, CheY family.
 
 
  0.982
AEA71810.1
Putative response regulator, CheY family.
 
 
  0.980
AEA71809.1
Putative CheW protein.
 
  
 0.971
AEA67193.1
Putative Histidine kinase, CheA.
 
 
 0.908
AEA71807.1
Hypothetical protein.
       0.773
AEA71946.1
Conserved hypothetical protein.
  
     0.761
AEA72012.1
Conserved hypothetical protein.
  
     0.754
PSEBR_a96
Conserved hypothetical protein.
  
     0.753
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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