STRINGSTRING
AEA71828.1 AEA71828.1 AEA71827.1 AEA71827.1 AEA71829.1 AEA71829.1 AEA71830.1 AEA71830.1 AEA71831.1 AEA71831.1 metXS metXS AEA67931.1 AEA67931.1 AEA66465.1 AEA66465.1 AEA71824.1 AEA71824.1 AEA72029.1 AEA72029.1 AEA71251.1 AEA71251.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA71828.1Conserved hypothetical protein. (144 aa)    
Predicted Functional Partners:
AEA71827.1
Putative methionine biosynthesis protein, MetW.
      0.915
AEA71829.1
Conserved hypothetical protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
  
    0.901
AEA71830.1
Putative coproporphyrinogen dehydrogenase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
       0.809
AEA71831.1
Conserved hypothetical protein, putative membrane protein.
       0.763
metXS
Putative homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.
       0.736
AEA67931.1
Conserved hypothetical protein.
  
     0.648
AEA66465.1
Conserved hypothetical protein.
  
     0.637
AEA71824.1
Conserved hypothetical protein, putative membrane protein.
 
     0.551
AEA72029.1
Putative cytochrome c5.
  
     0.546
AEA71251.1
Conserved hypothetical protein.
  
     0.540
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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