Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEA66557.1 | AEA71217.1 | PSEBR_a414 | PSEBR_a4798 | Conserved hypothetical protein. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.777 |
| AEA66557.1 | ftsI | PSEBR_a414 | PSEBR_a4627 | Conserved hypothetical protein. | Putative peptidoglycan glycosyltransferase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.722 |
| AEA66557.1 | mrdA | PSEBR_a414 | PSEBR_a4964 | Conserved hypothetical protein. | Putative penicillin-binding protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.460 |
| AEA66557.1 | mrdB | PSEBR_a414 | PSEBR_a4963 | Conserved hypothetical protein. | Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.494 |
| AEA66557.1 | mtgA | PSEBR_a414 | PSEBR_a5334 | Conserved hypothetical protein. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.558 |
| AEA67903.1 | AEA71217.1 | PSEBR_a1696 | PSEBR_a4798 | Putative serine-type D-Ala-D-Ala carboxypeptidase. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.636 |
| AEA67903.1 | AEA71384.1 | PSEBR_a1696 | PSEBR_a4960 | Putative serine-type D-Ala-D-Ala carboxypeptidase. | Putative cell division-related protein; Belongs to the peptidase S11 family. | 0.922 |
| AEA67903.1 | mrdA | PSEBR_a1696 | PSEBR_a4964 | Putative serine-type D-Ala-D-Ala carboxypeptidase. | Putative penicillin-binding protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.420 |
| AEA67903.1 | mtgA | PSEBR_a1696 | PSEBR_a5334 | Putative serine-type D-Ala-D-Ala carboxypeptidase. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.656 |
| AEA71217.1 | AEA66557.1 | PSEBR_a4798 | PSEBR_a414 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Conserved hypothetical protein. | 0.777 |
| AEA71217.1 | AEA67903.1 | PSEBR_a4798 | PSEBR_a1696 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Putative serine-type D-Ala-D-Ala carboxypeptidase. | 0.636 |
| AEA71217.1 | AEA71384.1 | PSEBR_a4798 | PSEBR_a4960 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Putative cell division-related protein; Belongs to the peptidase S11 family. | 0.599 |
| AEA71217.1 | ftsI | PSEBR_a4798 | PSEBR_a4627 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Putative peptidoglycan glycosyltransferase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.764 |
| AEA71217.1 | mrdA | PSEBR_a4798 | PSEBR_a4964 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Putative penicillin-binding protein; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.630 |
| AEA71217.1 | mrdB | PSEBR_a4798 | PSEBR_a4963 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.688 |
| AEA71217.1 | mtgA | PSEBR_a4798 | PSEBR_a5334 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.677 |
| AEA71217.1 | rlpA | PSEBR_a4798 | PSEBR_a4961 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Conserved hypothetical protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides. | 0.673 |
| AEA71384.1 | AEA67903.1 | PSEBR_a4960 | PSEBR_a1696 | Putative cell division-related protein; Belongs to the peptidase S11 family. | Putative serine-type D-Ala-D-Ala carboxypeptidase. | 0.922 |
| AEA71384.1 | AEA71217.1 | PSEBR_a4960 | PSEBR_a4798 | Putative cell division-related protein; Belongs to the peptidase S11 family. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.599 |
| AEA71384.1 | ftsI | PSEBR_a4960 | PSEBR_a4627 | Putative cell division-related protein; Belongs to the peptidase S11 family. | Putative peptidoglycan glycosyltransferase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.453 |
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