Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA71854.1 | AEA71855.1 | PSEBR_a5351 | PSEBR_a5352 | Conserved hypothetical protein. | Putative protease. | 0.555 |
AEA71854.1 | AEA71856.1 | PSEBR_a5351 | PSEBR_a5353 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.459 |
AEA71855.1 | AEA71854.1 | PSEBR_a5352 | PSEBR_a5351 | Putative protease. | Conserved hypothetical protein. | 0.555 |
AEA71855.1 | AEA71856.1 | PSEBR_a5352 | PSEBR_a5353 | Putative protease. | Conserved hypothetical protein. | 0.563 |
AEA71856.1 | AEA71854.1 | PSEBR_a5353 | PSEBR_a5351 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.459 |
AEA71856.1 | AEA71855.1 | PSEBR_a5353 | PSEBR_a5352 | Conserved hypothetical protein. | Putative protease. | 0.563 |
AEA71856.1 | AEA71857.1 | PSEBR_a5353 | PSEBR_a5354 | Conserved hypothetical protein. | Putative MFS transporter. | 0.525 |
AEA71856.1 | rlmL | PSEBR_a5353 | PSEBR_a1694 | Conserved hypothetical protein. | Putative RNA methylase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | 0.444 |
AEA71857.1 | AEA71856.1 | PSEBR_a5354 | PSEBR_a5353 | Putative MFS transporter. | Conserved hypothetical protein. | 0.525 |
rlmL | AEA71856.1 | PSEBR_a1694 | PSEBR_a5353 | Putative RNA methylase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family. | Conserved hypothetical protein. | 0.444 |