STRINGSTRING
PSEBR_a54 PSEBR_a54 PSEBR_a55 PSEBR_a55 PSEBR_a56 PSEBR_a56 PSEBR_a57 PSEBR_a57 PSEBR_a58 PSEBR_a58 AEA69242.1 AEA69242.1 AEA70054.1 AEA70054.1 PSEBR_a59 PSEBR_a59 AEA71472.1 AEA71472.1 AEA67682.1 AEA67682.1 AEA68693.1 AEA68693.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSEBR_a54Putative lipoprotein. (211 aa)    
Predicted Functional Partners:
PSEBR_a55
Conserved hypothetical protein.
 
   0.969
PSEBR_a56
Putative ABC transporter, ATP-binding component.
 
    0.959
PSEBR_a57
Putative ABC transporter, permease component.
 
  
 0.949
PSEBR_a58
Conserved hypothetical protein.
       0.675
AEA69242.1
Conserved hypothetical protein; glycosyltransferase family protein.
  
     0.549
AEA70054.1
Putative lipoprotein.
  
     0.506
PSEBR_a59
Putative peptidase.
       0.459
AEA71472.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
  
    0.436
AEA67682.1
Flagellar basal body-associated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
    
   0.412
AEA68693.1
Putative Flagellar basal-body rod protein flgC.
    
   0.412
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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