STRINGSTRING
AEA72077.1 AEA72077.1 AEA72076.1 AEA72076.1 AEA72078.1 AEA72078.1 AEA72079.1 AEA72079.1 AEA72081.1 AEA72081.1 AEA72083.1 AEA72083.1 AEA72084.1 AEA72084.1 AEA72080.1 AEA72080.1 AEA72082.1 AEA72082.1 macB macB AEA72085.1 AEA72085.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA72077.1Putative ABC transporter, permease component. (398 aa)    
Predicted Functional Partners:
AEA72076.1
Putative ABC transporter, periplasmic component.
 
    0.977
AEA72078.1
Putative ABC transporter, ATP-binding component.
 
 
 0.973
AEA72079.1
Putative serine/threonine protein kinase.
 
    0.957
AEA72081.1
Conserved hypothetical protein.
 
    0.912
AEA72083.1
Conserved hypothetical protein.
  
  
 0.872
AEA72084.1
Conserved hypothetical protein.
 
    0.860
AEA72080.1
Putative phosphatase.
  
    0.859
AEA72082.1
Conserved hypothetical protein.
 
    0.851
macB
Macrolide ABC transporter, ATP-binding/permease components; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.848
AEA72085.1
Conserved hypothetical protein; putative lipoprotein.
 
    0.829
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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