STRINGSTRING
AEA72098.1 AEA72098.1 AEA72099.1 AEA72099.1 AEA72101.1 AEA72101.1 AEA66581.1 AEA66581.1 AEA66582.1 AEA66582.1 AEA72097.1 AEA72097.1 AEA72100.1 AEA72100.1 rpmE rpmE AEA71471.1 AEA71471.1 AEA72093.1 AEA72093.1 AEA72094.1 AEA72094.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA72098.1Conserved hypothetical protein. (144 aa)    
Predicted Functional Partners:
AEA72099.1
Conserved hypothetical protein.
  
 
 0.987
AEA72101.1
Conserved hypothetical protein.
  
 
 0.976
AEA66581.1
Hypothetical protein.
  
 
 0.758
AEA66582.1
Hypothetical protein.
  
 
 0.758
AEA72097.1
Putative type VI secretion system, Vgr family.
  
  
 0.755
AEA72100.1
Conserved hypothetical protein.
       0.746
rpmE
50S ribosomal protein L31; Binds the 23S rRNA.
   
  
 0.677
AEA71471.1
Riboflavin synthase alpha chain.
   
    0.611
AEA72093.1
Conserved hypothetical protein.
  
    0.558
AEA72094.1
Conserved hypothetical protein.
  
  
 0.530
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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